Lab technician

Publication Policy

We request that any publications, posters, or oral presentations resulting from work performed by The Metabolomics Innovation Centre acknowledge TMIC. This allows the Centre to report information to our funding agencies, such as impact on Canadian researchers. Clients should also keep us apprised of any publications, posters, or oral presentations arising from work performed at TMIC.

Publication list last updated October 12, 2021.

Publication List


  1. J. Zheng, M. Johnson, R. Mandal, and David S. Wishart A Comprehensive Targeted Metabolomics Assay for Crop Plant Sample Analysis Metabolites DOI: 103390/metabo11050303 (2021) PubMed ID: 34064699
  2. G. Zhang, R.Mandal, David S. Wishart, and B. Ametaj A Multi-Platform Metabolomics Approach Identifies Urinary Metabolite Signatures that Differentiate Ketotic from Healthy Dairy Cows Fronteirs in Veterinary Science DOI: 10.3389/fvets.2021.595983 (2021) PubMed ID: 33575283
  3. G. Zhang, D. Tobolski, G. Zwierzchoqski, R. Mandal, David S. Wishart, and B. N. Ametaj A Targeted Serum Metabolomics GC-MS Approach Identifies Predictive Blood Biomarkers for Retained Placenta in Holstein Dairy Cows Metabolites DOI: 10.3390/metabo11090633 (2021)
  4. L. Wu, Y. Han, Z. Zheng, G. Peng, P. Liu, S. Yue, S. Zhu, J. Chen, H. Lv, L. Shao, Y. Sheng, Y. Wang, Liang Li, L. Li and B. Wan Altered Gut Microbial Metabolites in Amnestic Mild Cognitive Impairment and Alzheimer?s Disease: Signals in Host-Microbe Interplay Nutrients DOI: 10.3390/nu13010228 (2021) PubMed ID: 33466861
  5. M. Armstrong, P. de la Mata, and James Harynuk An Efficient and Accurate Numerical Determination of the Cluster Resolution Metric in Two Dimensions. Journal of Chemometrics DOI: 10.1002/cem.3346 (2021)
  6. M. LeVatte, A. H. Keshteli, P. Zarei, and David S. Wishart Applications of Metabolomics to Precision Nutrition Lifestyle Genomics DOI: 10.1159/000518489 (2021) PubMed ID: 34518463
  7. H. Almblad, T. E. Randall, J. D. Rich, F. Liu, K. Leblanc, R. Groves, W. Kittichotirat, G. L. Winsor, N. Fournier, E. Au, J. Groizeleau, J. d. Rich, Y. Lou, E. Granton, L. K. Jennigs, L. A. Singletary, T. M. L. Winstone, N. M. Good, R. E. Bumgarner, M. F. Hynes, M. Singh, M. S. Stietz, F. S. L. Brinkman, A. Kumar, A. K. C. Brassinga, M. R. Parsek, B. S. Tseng, Ian A. Lewis, B. G. Yipp, J. L. MacCallum, J. J. Harrison Bacterial Cyclic Diguanylate Signaling Networks Sense Temperature Nature Communications DOI: 10.1038/s41467-021-22176-2 (2021) PubMed ID: 33790266
  8. S. Tian, X. Cao, R. Greiner, C. Li, A. Guo, and David S. Wishart CyProduct: A Software Tool for Accurately Predicting the Byproducts of Human Cytochrome P450 Metabolism Journal of Chemical Information and Modeling 10 Journal of Chemical Information and Modeling DOI: 10.1021/acs.jcim.1c00144 (2021) PubMed ID: 34038112
  9. X. Su, J. Yu, N. Wang, S. Zhao, W. Han, D. Chen, Liang Li, and L. Li High-Coverage Metabolome Analysis Reveals Significant Diet Effects of Autoclaved and Irradiated Feed on Mouse Fecal and Urine Metabolomics Molecular Nutrition and Food Research DOI: 10.1002/mnfr.202100110 (2021) PubMed ID: 33861501
  10. X. Su, D. Chen, Liang Li, and L Li High-Coverage Quantitative Liver Metabolomics Using Perfused and Non-Perfused Liver Tissues Analytica Chimica Acta DOI: 10.1016/j.aca.2021.338300 (2021) PubMed ID: 33714446
  11. A. Z. Buzatto, M. A. Jabar, I. Nizami, M. Dasouki, Liang Li and A. M. A. Rahman Lipidome Alterations in Cystic Fibrosis Patients, Induced by CFTR Mutation, and Lung Function Journal of Proteome Research Journal of Proteome Research (2021) PubMed ID: 33089695
  12. David S. Wishart, B. Bartok, E. Oler, K. Y. H. Liang, Z. Budinski, M. Berjanskii, A. Guo, X. Cao, and M. Wilson MarkerDB: An Online Database of Molecular Biomarkers Nucleic Acids Research DOI: 10.1093/nar/gkaa1067 (2021) PubMed ID: 33245771
  13. Michael Overduin, H. Wille, and D. Westaway Multisite Interactions of Prions with Membranes and Native Nanodiscs Chemistry and Physics of Lipids DOI: 10.1016/j.chemphyslip.2021.105063 (2021) PubMed ID: 33600804
  14. P. Baddam, V. Biancardi, D. M. Roth, F. Eaton, C. Thereza-Bussolaro, R. Mandal, David S. Wishart, A. Barr, J. Maclean, C. Flores-Mir, S. Pagliardini, and D. Graf Neural Crest-Specific Deletion of Bmp7 Leads to Midfacial Hypoplasia, Nasal Airway Obstruction, and Disordered Breathing Modelling Obstructive Sleep Apnea Disease Models & Mechanisms DOI: 10.1242/dmm.047738 (2021) PubMed ID: 33431521
  15. M. Saoi and Philip Britz-McKibbin New Advances in Tissue Metabolomics: A Review Metabolites DOI: 10.3390/metabo11100672 (2021)
  16. U. Verma, M. Gautam, B. Parmar, K. Khaire, David S. Wishart, and S. Balakrishnan New Insights into the Obligatory Nature of Cyclooxygenase-2 and PGE2 During Early Chick Embryogenesis Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids DOI: 10.1016/j.bbalip.2021.158889 (2021) PubMed ID: 33464433
  17. X. Luo, Y. Wu, and Liang Li Normalization of Samples of Limited Amounts in Quantitative Metabolomics Using Liquid Chromatography Fluorescence Detection with Dansyl Labeling of Metabolites Analytical Chemistry Analytical Chemistry DOI: 10.1021/acs.analchem.0c04508 (2021) PubMed ID: 33554593
  18. T. Rafiq, S. M. Azab, K. K. Teo, L. Thabane, S. S. Anand, K.M. Morrison, R.J. de Souza, and Philip Britz-McKibbin Nutritional Metabolomics and the Classification of Robust Dietary Biomarkers: A Critical Review Advances in Nutrition DOI: 10.1093/advances/nmab054 (2021) PubMed ID: 34015815
  19. A. N. Michi, B. G. Yipp, A. Dufour, F. Lopes, and D. Proud PGC-1α Mediates a Metabolic Host Defense Rsponse in Human Airway Epithelium During Rhinovirus Infections Nature Communications DOI: 10.1038/s41467-021-23925-z (2021)
  20. I. Shahid, J. Han, S. Hanook, K. A. Malik, Christoph H. Borchers, and S. Mehnaz Profiling of Metabolites of Bacillus spp. and their Application in Sustainable Plant Growth Promotion and Biocontrol Frontiers in Sustainable Food Systems, section Crop Biology and Sustainability DOI: 10.3389/fsufs.2021.605195 (2021)
  21. T. A. Kervin and Michael Overduin Regulation of the Phosphoinositide Code by Phosphorylation of Membrane Readers Cells DOI: 10.3390/cells10051205 (2021) PubMed ID: 34069055
  22. K. Tomlinson, T. W. F. Lung, F. Dach, M. K. Annavajhala, S. J. Gabryszewski, R. A. Groves, M. Drikic, N. J. Francoeur, S. H. Sridhar, M. L. Smith, S. Khanal, C. J. Britto, R. Sebra, Ian A. Lewis, A. Uhlemann, B. C. Kahl, A. S. Prince, S. A. Riquelme Staphylococcus Aureus Induces an Itaconate-Dominated Immunometabolic Response that Drives Biofilm Formation Nature Communications DOI: 10.1038/s41467-021-21718-y (2021) PubMed ID: 33658521
  23. Y. Lopez-Hernandez, J. Monarrez-Espino, A. H. Oostdam, J. E. C. Delgado, L. Zhang, J. Zheng, J. O. Valdez, R. Mandal, F. O. Gonzalez, J. C. Borrego, F. M. T. Medinilla, J. A. Lopez, J. A. E. Moreno, David S. Wishart Targeted Metabolomics Identifies High Performing Diagnostic and Prognostic Biomarkers for COVID-19 Research Square Research Square DOI: 10.21203/ (2021)
  24. M. Shanmuganathan, Z. Kroezen, B. Gill, S. Azab, R. J. de Souza, K. K. Teo, S. Atkinson, P. Subbarao, D. Desai, S. S. Anand, and Philip Britz-McKibbin The Maternal Serum Metabolome by Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry: A Standardized Data Workflow for Large-Scale Epidemiological Studies Nature Protocols DOI: 10.1038/s41596-020-00475-0 (2021) PubMed ID: 33674789
  25. A. Z. Buzatto, A. Malkawi, A. H. Mujamammi, E. M. Sabi, Liang Li and A. M. A. Rahman Tissue Lipidomic Alterations Induced by Prolonged Dexamethasone Treatment Journal of Proteome Research Journal of Proteome Research DOI: 10.1021/acs.jproteome.0c00759 (2021) PubMed ID: 33557525
  26. M. Yamamoto, M. Shanmuganathan, L. Hart, N. Pai, and Philip Britz-McKibbin Urinary Metabolic Signatures Enable Differential Diagnosis and Noninvasive Treatment Monitoring of Pediatric Inflammatory Bowel Disease Metabolites Metabolites DOI: 10.3390/metabo11040245 (2021) PubMed ID: 33921143


  1. L. Zhang, J. Zheng, R. Ahmed, G. Huang, J. Reid, R. Mandal, A. Maksymuik, D. S. Sitar, P. S. Tappia, B. Ramjiawan, P. Joubert, A. Russo, C. D. Rolfo, and David S. Wishart A High-Performing Plasma Metabolite Panel for Early-Stage Lung Cancer Detection Cancers Cancers DOI: 10.3390/cancers12030622 (2020) PubMed ID: 32156060
  2. A. Badhwar, G. P. McFall, S. Sapkota, S. E. Black, H. Chertkow, S. Duchesne, M. Masellis, Liang Li, R. A. Dixon, and P. Bellec A Multiomics Approach to Heterogeneity in Alzheimer's Disease: Focused Review and Roadmap Brain DOI: 10.1093/brain/awz384 (2020) PubMed ID: 31891371
  3. S. Lang, A. Sharma, B. Foster, I. W. Gibson, J. Ho, P. Nickerson, D. Wishart, and T. Blydt Hansen Age and Sex Determine Conversion from Immediate?release to Extended?release Tacrolimus in a Multi?center Cohort of Canadian Pediatric Renal Transplant Recipients Pediatric Transplant DOI: 10.1111/petr.13959 (2020) PubMed ID: 33368914
  4. V. R. Richard, R. P. Zahedi, S. Eintracht, Christoph H. Borchers An LC-MRM Assay for the Quantification of Metanephrines from dried Blood Spots for the diagnosis of Pheochromocytomas and Paragangliomas Analytica Chimica Acta DOI: 10.1016/j.aca.2020.06.020 (2020) PubMed ID: 32825898
  5. P. M. Ryan, E. Patterson, R. M. Kent, H. Stack, P. M. O'Connor, K. Murphy, V. L. Peterson, R. Mandal, David S. Wishart, T. G. Dinan, J. F. Cryan, R. J. Seeley, C. Stanton, and R. P. Ross Author Correction: Recombinant Incretin-Secreting Microbe Improves Metabolic Dysfunction in High-Fat Diet Fed Rodents Scientific Reports DOI: 10.1038/s41598-020-59133-w (2020) PubMed ID: 32024931
  6. A. D. Baxevanis, G. D. Bader, and David S. Wishart Bioinformatics Wiley ISBN1119335582 (2020) PubMed ID: 9
  7. G. Biban and Philip Britz-McKibbin Biomonitoring of Smoke Exposure in Firefighters: A Review Current Opinion Science Direct DOI: 10.1016/j.coesh.2020.04.002 (2020)
  8. S. A. Goldansaz, S. Markus, M. Berjanskii, M. Rout, A. C. Guo, Z. Wang, G. Plastow, and David S. Wishart Candidate Serum Metabolite Biomarkers of Residual Feed Intake and Carcass Merit in Sheep Journal of Animal Science DOI: 10.1093/jas/skaa298 (2020) PubMed ID: 32926096
  9. N. Drouin, M. van Mever, W. Zhang, E. Tobolkina, S. Ferre, A. Servais, M. Gou, L. Nyssen, M. Fillet, G. S. M. Lageveen-Kammeijer, J. Nouta, A. J. Chetwynd, I. Lynch, J. A. Thron, J. Meixner, C. Lobner, M. Taverna, S. Liu, N. T. Tran, T. Franzois, A. Lechner, R. Nehme, G. A. H. D. Banni, R. Nasreddine, C. Colas, H. H. Linder, K. Faserl, C. Neusub, M. Nelke, S. Lammerrer, C. Perrin, C. Bich-Muracciole, C. Barbas, A. L. Gonzalvez, A. Guttman, M. Szigeti, Philip Britz-McKibbin, Z. Kroezen, M. Shanmuganathan, P. Nemes, E. P. Portero, T. Hankemeir, S. Codesido, V. Gonzalez-Ruiz, S. Rudaz, and R. Ramuatar Capillary Electrophoresis-Mass Spectrometry at Trial by Metabo-Ring: Effective Electrophoretic Mobility for Reproducible and Robust Compound Annotation Analytical Chemistry DOI: 10.1021/acs.analchem.0c03129 (2020) PubMed ID: 32961048
  10. T. Liu, R. Wang, J. Han, Y. Qiu, Christoph H. Borchers, V. Ling, and J. Wang Changes in Plasma Bile Acid Profiles After Partial Internal Biliary Diversion in PFIC2 Patients Annals of Translational Medicine DOI: 10.21037/atm.2020.01.103 (2020) PubMed ID: 32309332
  11. D. Beriashvili, N. R. Spencer, T. Dieckmann, Michael Overduin, and M. Palmer Characterization of Multimeric Daptomycin Bound to Lipid Nanodiscs Formed by Calcium-tolerant Styrene-maleic Acid Co-polymer Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes DOI: 10.1016/j.bbamem.2020.183234 (2020) PubMed ID: 32145282
  12. Q. Pan, D. Wang, D. Chen, Y. Sun, X. Feng, X. Shi, X., Y. Xu, X. Luo, J. Yu, Y. Li, H. Cao, and Liang Li Characterizing the Effects of Hypoxia on the Metabolic Profiles of Mesenchymal Stromal Cells Derived from Three Tissue Sources Using Chemical Isotope Labeling Liquid Chromatography-Mass Spectrometry Cell and Tissue Research DOI: 10.1007/s00441-019-03131-6 (2020) PubMed ID: 31823005
  13. S. Zhao and Liang Li Chemical Derivatization in LC-MS Based Metabolomics Study Trends Trends in Analytical Chemistry DOI: 10.1016/j.trac.2020.115988 (2020)
  14. N. Esquerre, L. Basso, M. Defaye, F. A. Vicentini, N. Cluny, D. Bihan, S. A. Hirota, A. Schick, H. B. Jijon, Ian A. Lewis, M. B. Geuking, K. A. Sharkey, C. Altier, and Y. Nasser Colitis-Induced Microbial Perturbation Promotes Postinflammatory Visceral Hypersensitivity Cellular and molecular Gastroenterology and Hepatology DOI: 10.1016/j.jcmgh.2020.04.003 (2020) PubMed ID: 32289500
  15. B. M. Graves, T. J. Johnson, R. T. Nishida, R. P. Dias, B. Savareear, Jamles J. Harynuk, M. Kazemimanesh, J. S. Olfert, and A. M. Boies Comprehensive Characterization of Mainstream Marijuana and Tobacco Ssmoke Scientific Reports DOI: 10.1038/s41598-020-63120-6 (2020) PubMed ID: 32345986
  16. A. Z. Buzatto, I. Sarkar, S. van Drunen Littel-van den Hurk, and Liang Li Comprehensive Lipidomic and Metabolomic Analysis for Studying Metabolic Changes in Lung Tissue Induced by a Vaccine against Respiratory Syncytial Virus ACS ACS Infectious Diseases DOI: 10.1021/acsinfecdis.0c00210 (2020) PubMed ID: 32633123
  17. J. Zheng, L. Zhang, M. Johnson, R. Mandal, and David S Wishart Comprehensive Targeted Metabolomic Assay for Urine Analysis Analytical Chemistry DOI: 10.1021/acs.analchem.0c01682 (2020) PubMed ID: 32634308
  18. A. Z. Buzatto, B. K. Kwon, and Liang Li Development of a NanoLC-MS Workflow for High-Sensitivity Global Lipidomic Analysis Analytica Chimica Acta DOI: 10.1016/j.aca.2020.09.001 (2020) PubMed ID: 33190714
  19. L. A. Dahabiyeh, A. K. Malkawi, X. Wang, D. Colak, A. H. Mujamammi, E. M. Sabi, Liang Li, M. Dasouki, and A. M. A. Rahman Dexamethasone-Induced Perturbations in Tissue Metabolomics Revealed by Chemical Isotope Labeling LC-MS analysis Metabolites DOI: 10.3390/metabo10020042 (2020) PubMed ID: 31973046
  20. K.C. Bauer, K.E. Huus, E. M. Brown, T. Bozorgmehr, C. Petersen, M. S. Cirstea, S. E. Woodward, J. McCoy, J. Hun, R. Pamplona, V. Ayala, and B. B. Finlay Dietary Intervention Reverses Fatty Liver and Altered Gut Microbiota during Early-life Undernutrition mSystems DOI: 10.1128/mSystems.00499-20 (2020) PubMed ID: 32900869
  21. C. Fromont, A. Atzori, D. Kaur, L. Hashmi, G. Greco, A. Cabanillas H. V. Nguyen, D. H. Jones, M. Garzon, A. Varela, B. Stevenson, G. P. Iacobini, M. Lenoir, S. Rajesh, C. Box, J. Kumar, P. Grant, V. Novitskaya, J. Morgan, F.J. Sorrell, C. Redondo, A. Kramer, C. J. Harris, B. Leighton, S. P. Vickers, S. C. Cheetham, C. Kenyon, A. M. Grabowska, Michael Overduin, F. Berditchevski, C. J. Weston, S. Knapp, P. M. Fischer, and S. Butterworth Discovery of Highly Selective Inhibitors of Calmodulin-dependent Kinases that Restore Insulin Sensitivity in the Diet-induced Obese in vivo Mouse Model Journal of Medicinal Chemistry DOI: 10.1021/acs.jmedchem.9b01803 (2020) PubMed ID: 32433887
  22. A. Masood, M. Jacob, X. Gu, M. A. Jabar, H. Benabdelkamel, I. Nizami, Liang Li, M. Dasouki, and A. M. A. Rahman Distinctive Metabolic Profiles Between Cystic Fibrosis Mutational Subclasses and Lung function Metabolomics DOI: 10.1007/s11306-020-01760-5 (2020) PubMed ID: 33394183
  23. X. Gu, M. A. Dubayee, A. Alshahrani, A. Masood, H. Benbdelkamel, M. Zahra, Liang Li, A. M. A. Rahman and A. Aljada Distinctive Metabolomics Patterns Associated with Insulin Resistance and Type 2 Diabetes Mellitus Frontiers in Molecular Biosciences DOI: 10.3389/fmolb.2020.609806 (2020) PubMed ID: 33381523
  24. A. J. Hoffman, I. W. Gibson, J. Ho, P. Nickerson, D. Rush, A. Sharma, David S. Wishart, and T. D. Blydt-Hansen Early Surveillance Biopsy Utilization and Management of Pediatric Renal Allograft Acute T cell-mediated Rejection in Canadian Centers: Observations from the PROBE Multicenter Cohort Study Pediatrics Transplantation DOI: 10.1111/petr.13870 (2020) PubMed ID: 33026135
  25. J. B. Magan, T. F. O'Callaghan, J. Zheng, L. Zhang, R. Mandal, D. Hennessy, M. A. Fenelon., David S. Wishart, A. L. Kelly, and N. A. McCarthy Effect of Diet on the Vitamin B Profile of Bovine Milk-Based Protein Ingredients Food Foods DOI: 10.3390/foods9050578 (2020) PubMed ID: 32375412
  26. L. Hart, Y. Farbod, J. C. Szamosi, M. Yamamoto, Philip Britz-McKibbin, C. Halgren, M. Zachos, and N. Pai Effect of Exclusive Enteral Nutrition and Corticosteroid Induction Therapy on the Gut Microbiota of Pediatric Patients with Inflammatory Bowel Disease Nutrients DOI: 10.3390/nu12061691 (2020) PubMed ID: 32517036
  27. D. chen, W. Han, T. Huan, Liang Li, and L. Li Effects of Freeze-Thaw Cycles of Blood Samples on High-Coverage Quantitative Metabolomics. Analytical Chemistry DOI: 10.1021/acs.analchem.0c01610 (2020) PubMed ID: 32469506
  28. S. M. Azab, R. J. de Souza, K. K. Teo, S. S. Anand, N. C. Williams, J. Holzschuher, C. McGlory, S. M. Philips, and Philip Britz-McKibbin erum Nonesterified Fatty Acids have Utility as Dietary Biomarkers of Fat Intake from Fish, Fish Oil, and dairy in Women Journal of Lipid research DOI: 10.1194/jlr.D120000630 (2020) PubMed ID: 32234835
  29. W. Han and Liang Li Evaluating and Minimizing Batch Effects in Metabolomics Mass Spectrometry Review DOI: 10.1002/mas.21672 (2020) PubMed ID: 33238061
  30. P. Wangchuk, O. Lavers, David S. Wishart, and A. Loukas Excretory/Secretory Metabolome of the Zoonotic Roundworm Parasite Toxocara canis. Biomolecules DOI: 10.3390/biom10081157 (2020) PubMed ID: 32781793
  31. V. Neveu, G. Nicolas, R. M. Salek, David S. Wishart, and A. Scalbert Exposome-Explorer 2.0: An Update Incorporating Candidate Dietary Biomarkers and Dietary Associations with Cancer Risk Nucleic Acids Research DOI: 10.1093/nar/gkz1009 (2020) PubMed ID: 31724701
  32. P. Castellano-Escuder, R. Gonzalez-Dominguez, David S. Wishart, C. Andres-Lacueva, and A. Sanchez-Pla FOBI: An Ontology to Represent Food Intake Data and Associate it with Metabolomic Data Database | Oxford Academic DOI: 10.1093/databa/baaa033 (2020) PubMed ID: 32556148
  33. K. Vu, W. Lou, H. M. Tun, T. B. Konya, N. Morales-Lizcano, R. S. Chari, C. J. Field, D. S. Guttman, R. Mandal, David S. Wishart, M. B. Azad, A. B. Becker, P. J. Mandhane, T. J. Moraes, D. L. Lefebvre, M. R. Sears, S. E. Turvey, P. Subbarao, J. A. Scott, and A. L. Kozyrskyj From Birth to Overweight and Atopic Disease: Multiple and Common Pathways of the Infant Gut Microbiome Gastroenterology DOI: 10.1053/j.gastro.2020.08.053 (2020) PubMed ID: 32946900
  34. D. Zaidi, H. Q. Huynk, M. W. Carroll, R. Mandal, David S. Wishart, and E. Wine Gut Microenvironment and Bacterial Invasion in Pediatric Inflammatory Bowel Diseases Journal of Pediatric Gastroenterology and Nutrition DOI: 10.1097/MPG.0000000000002848 (2020) PubMed ID: 33093369
  35. D. Chen, S. Zhao, W. Han, E. Lo, X. Su, Liang Li, L. Li High Tolerance to Instrument Drifts by Differential Chemical Isotope Labeling LC-MS: A Case study of the Effect of LC Leak in Long-term Sample Runs on Quantitative Metabolome Analysis Journal of Mass Spectrometry DOI: 10.1002/jms.4589 (2020) PubMed ID: 32639693
  36. M. Esmaili, C. J. Brown, R. Shaykhotdinov, C. Acevedo-Morantes, Y. L. Wang, H. Wille, R. D. Gandour, S. R. Turner, and Michael Overduin Homogeneous Nanodiscs of Native Membranes Formed by Stilbene-maleic-acid Copolymers Nanoscale DOI: 10.1039/d0nr03435e (2020) PubMed ID: 32780785
  37. A. Foroutan, J. Devos, David S.Wishart, C. Li, M. Colazo, J. Kastelic, J. Thundathil and C. Fitzsimmons Impact of Prenatal Maternal Nutrition and Parental Residual Feed Intake (RFI) on mRNA Abundance of Metabolic Drivers of Growth and Development in Young Angus Bulls Livestock Science DOI: 10.1016/j.livsci.2020.104365 (2020)
  38. C. D. S. Weeraddana, V. P. Manolii, S. E. Strelkov, A. P. de la Mata, James J. Harynuk, and M. L. Evenden Infection of Canola by the Root Pathogen Plasmodiophora brassicae Increases Resistance to Aboveground Herbivory by Bertha armyworm, Mamestra configurata Walker (Lepidoptera: Noctuidae) Plant Science DOI: 10.1016/j.plantsci.2020.110625 (2020) PubMed ID: 33180705
  39. J. Lemay, M. Yamamoto, Z. Kroezen, M. Shanmuganathan, R. Ly, L. Hart, N. Pai, and Philip Britz McKibbin Lyophilized Fecal Short-chain Fatty Acid and Electrolyte Determination by Capillary Eelectrophoresis with Indirect UV Detection for Assessment of Pediatric Inflammatory Bowel Disease Journal of Pharmaceutical and Biomedical Analysis DOI: 10.1016/j.jpba.2020 (2020) PubMed ID: 33091761
  40. X. Wang and Liang Li Mass Spectrometry for Metabolome Analysis, invited review Mass Spectrometry Letters DOI: 10.5478/MSL.2020.11.2.17 (2020)
  41. G. Zwierzchowski, G. Zhang, R. Mandal, David S. Wishart, and B. N. Ametaj Mass-spec-based Urinary Metabotyping Around Parturition Identifies Screening Biomarkers for Subclinical Mastitis in Dairy Cows Research in Veterinary Science DOI: 10.1016/j.rvsc.2020.01.001 (2020) PubMed ID: 31931262
  42. R. J. de Souza, M. Shanmuganathan, A. Lamri, S. A. Atkinson, A. Becker, D. Desai, M. Gupta, P. J. Mandhane, T. J. Moraes, K. M. Morrison, P. Subbarao, K. K. Teo, S. E. Turvey, N. C. Williams, Philip Britz-McKibbin, and S. S. Anand Maternal Diet and the Serum Metabolome in Pregnancy: Robust Dietary Biomarkers Generalizable to a Multi-ethnic Birth Cohort Current Developments in Nutrition DOI: 10.1093/cdn/nzaa144 (2020) PubMed ID: 33073162
  43. P. Baloni, C. C. Funk, J. Yan, J. T. Yurkovich, A. Kueider-Paisley, K. Nho, A. Heinken, W. Jia, S. Mahmoudiandehkordi, G. Louie, A. J. Saykin, M. Arnold, G. Kastenmuller, W. J. Griffiths, I. Thiele, R. Kaddurah-Daouk, N. D. Price; Alzheimer's Disease Metabolomics Consortium Collaborators: R. Kaddurah-Daouk, A. Kueider-Paisley, G. Louie, P. M. Doraiswamy, C. Blach, A. Moseley, J. W. Thompson, S. Mahmoudiandehkhordi, K. Welsh-Balmer, B. Plassman, A. Saykin, K. Nho, G. Kastenmuller, M. Arnold, s. Bhattacharyya, X. Han, R. Baillie, O. Fiehn, D. Barupal, P. Meikle, S. Mazmanian, M. Kling, L. Shaw, J. Trojanowski, J. Toledo, C. van Duijin, T. Hankemier, I. Thiele, A. Heinken, N. Price, C. Funk, P. Baloni, W. Jia, David S. Wishart, R. Brinton, R. Chang, L. Farrer, R. Au, W. Qiu, P. W�rtz, L. Mangravite, J. Krumsiek, J. Newman, B. Zhang, and H. Moreno Metabolic Network Analysis Reveals Altered Bile Acid Synthesis and Metabolism in Alzheimer's Disease Cell Reports Medicine DOI: 10.1016/j.xcrm.2020.100138 (2020) PubMed ID: 33294859
  44. David S. Wishart Metabolomic Data Exploration and Analysis with the Human Metabolome Database Methods in Molecular Biology DOI: 10.1007/978-1-0716-0239-3_10 (2020) PubMed ID: 31953818
  45. D. Blackmore, Liang Li, N. Wang, W. Maksymowych, E. Yacyshyn, and Z. A. Siddiqi Metabolomic Profile Overlap in Prototypical Autoimmune Humoral disease: A Comparison of Myasthenia gravis and Rheumatoid arthritis Metabolomics DOI: 10.1007/s11306-019-1625-z (2020) PubMed ID: 31902059
  46. D. D. Fraser, M. Slesarev, C. M. Martin, M. Daley, M. A. Patel, M. R. Miller, E. K. Patterson, D. B. O'Gorman, S. E. Gill, David S. Wishart, R. Mandal, and G. Cepinskas Metabolomics Profiling of Critically Ill Coronavirus Disease 2019 Patients: Identification of Diagnostic and Prognostic Biomarkers Critical Care Explorations DOI: 10.1097/CCE.0000000000000272 (2020) PubMed ID: 33134953
  47. L. F. Mager, Re. Burkhard, N. Cooke, K. Brown, R. A. Groves, Ian A. Lewis, M. B. Geuking, and K. D. McCoy Microbiome-derived Inosine Modulates Response to Checkpoint Inhibitor Immunotherapy Science DOI: 10.1126/science.abc3421 (2020) PubMed ID: 32792462
  48. G. Zwierzchowski, G. Zhang, R. Mandal, David S. Wishart, and B. N. Ametaj Milk Metabotyping Identifies Metabolite Alterations in the Whole Raw Milk of Dairy Cows with Lameness. Journal of Agricultural Food Chemistry DOI: 10.1021/acs.jafc.9b08312 (2020) PubMed ID: 32223231
  49. A. H. Keshtali, R. Chibbar, R. Mandal, David s. Wishart, K. Madsen, and L. A. Dieleman, L.A. Mo1438 Urine and Serum Metabolomics Profiles Discriminate Ulcerative Colitis Patients with and without Primary Sclerosing cholangitis Gastroenterology DOI: 10.1016/S0016-5085(20)32880-8 (2020)
  50. M. Khorvash, N. Blinov, C. Ladner-Keay, J. Lu, J. M. Silverman, E. Gibbs, Y. Tian Wang, A. Kovalenko, David S. Wishart, and N. R. Cashman Molecular Interactions Between Monoclonal Oligomer-specific Antibody 5E3 and its Amyloid Beta Cognates PLOS ONE DOI: 10.1371/journal.pone.0232266 (2020) PubMed ID: 32469918
  51. M. Esmaili, B. P. Tancowny, X. Wang, A. Moses, L. M. Cortez, V. L. Sim, H. Wille, and Michael Overduin Native Nanodiscs Formed by Styrene maleic acid Copolymer Derivatives Help Recover Infectious Prion Multimers Bound to Brain-derived Lipids Journal of Biological Chemistry DOI: 10.1074/jbc.RA119.012348 (2020) PubMed ID: 32358064
  52. S. M. Aleidi, L. A. Dahabiyeh, X. Gu, M. A. Dubayee, A. Alshahrani, H. Benabdelkamel, M. Mujammami, Liang Li, A. Aljadaa and A. M. A. Rahman Obesity Connected Metabolic Changes in Type 2 Diabetic Patients Treated with Metformin Frontiers in Pharmacology, Pharmacogenetics and Pharmacogenomics DOI: 10.3389/fphar.2020.616157 (2020) PubMed ID: 33664666
  53. B. S. Borys, T. So, J. Colter, T. Dang, E. L. Roberts, T. Revay, L. Larijani, R. Krawetz, Ian A. Lewis, B. Argiropoulos, D. E. Rancourt, S. Jung, Y. Hashimura, B. Lee, and m. S. Kallos Optimized Serial Expansion of Human Induced Pluripotent Stem Cells Using Low?density Inoculation to Generate Clinically Relevant Quantities in Vertical?wheel Bioreactors STEM CELLS Translational Medicine DOI: 10.1002/sctm.19-0406 (2020) PubMed ID: 32445290
  54. David S. Wishart, C. Li, A. Marcu, H. Badran, A. Pon, Z. Budinski, J. Patron, D. Lipton, X. Cao, E. Oler, K. Li, M. Paccoud, C. Hong, A. C. Guo, C. Chan, W. Wei, and M. Ramirez-Gaona PathBank: A Comprehensive Pathway Database for Model Organisms Nucleic Acids Research DOI: 10.1093/nar/gkz861 (2020) PubMed ID: 31602464
  55. L. S. Marmont, G. B. Whitfield, R. Pfoh, R. J. Williams, T. E. Randall, A. Ostaszewski, e. Razvi, R. A. Groves, H. Robinson, M. Nitz, M. R. Parsek, Ian A. Lewis, J. C. Whitney, J. J. Harrison, and P. L. Howel PelX is a UDP- N-acetylglucosamine C4-epimerase Involved in Pel Ppolysaccharide-dependent Biofilm Formation Journal of Biological Chemistry DOI: 10.1074/jbc.RA120.014555 (2020) PubMed ID: 32601062
  56. T. Schroder, W. Wang, K. Cochrane, T. Vayali, A. Cottle, G. Goh, A. Marcu, D. Parikh, E. Tsoi, David S. Wishart, M. Anwar, and R. Fraser Personalized Nutrition Recommendations Improve Plasma Metabolite Concentrations Related to Dietary Intake Current Current Developments in Nutrition DOI: 10.1093/cdn/nzaa058_032 (2020)
  57. P. Maruvada, J. W. Lampe, David S. Wishart David, D. Barupal, D. N. Chester, D. Dodd, Y. Djoumbou-Feunang, P. C. Dorrestin, L. O. Dragsted, J. Draper, L. C. Duffy, J. T. Dwyer, N. J. Emenaker, O. Fiehn, R. E. Gerszten, F. B. Hu, R. W. Karp, D. M. Klurfeld, M. R. Laughlin, A. R. Little, C. J. Lynch, S. C. Moore, H. L Nicastro, D. M. O'Brien, J. M. Ordovas, S. K. Osganian, M. Playdon, R. Prentice, D. Raftery, N. Reisdorph, H. M. Roche, S. A. Ross, S. Sang, A. Scalbert, P. R. Srinivas, and S. H. Zeisel Perspective: Dietary Biomarkers of Intake and Exposure�Exploration with Omics Approaches Advances in Nutrition DOI: 10.1093/advances/nmz075 (2020) PubMed ID: 32173746
  58. M. Saoi, K. M. Kennedy, W. Gohir, D. M. Sloboda, and Philip Britz-McKibbin Placental Metabolomics for Assessment of Sex-specific Differences in Fetal Development During Normal Gestation Scientific Reports DOI: 10.1038/s41598-020-66222-3 (2020) PubMed ID: 32523064
  59. David S. Wishart, J. Godzien, A. Gil-de-la-Fuente, R. Mandal, R. Rajabzadeh, H. Pirimoghadam, C. Ladner-Keay, A. Otero and C. Barbas Processing Metabolomics and Proteomics Data with Open Software: A Practical Guide - Chapter 3: Metabolomics Metabolomics Royal Society of Chemistry DOI: 10.1039/9781788019880-00041 (2020)
  60. S. Azab, R. Hum, and Philip Britz-McKibbin Rapid Biomonitoring of Perfluoroalkyl Substance Exposures in Serum by Multisegment Injection?nonaqueous Capillary Electrophoresis?tandem Mass Spectrometry Analytical Science Advances DOI: 10.1002/ansa.202000053 (2020)
  61. B. Gill, K. Jobst, and Philip Britz-McKibbin Rapid Screening of Urinary 1-Hydroxypyrene Glucuronide by Multisegment Injection-Capillary Electrophoresis-Tandem Mass Spectrometry: A High-Throughput Method for Biomonitoring of Recent Smoke Exposures. Analytical Chemistry DOI: 10.1021/acs.analchem.0c03212 (2020) PubMed ID: 32901481
  62. C. D. Kay, M. N. Clifford, P. Mena, G. J. McDougall, C. Andres-Lacueva, A. Cassidy, D. Del Rio, N. Kuhnert, C. Manach, G. Pereira-Caro, A. Rodriguez-Mateos, A. Scalbert, F. Tomas-Barberan, G. Williamson, David S. Wishart, and A. Crozier Recommendations for Standardizing Nomenclature for Dietary (poly) Phenol Catabolites The American Journal of Clinical Nutrition DOI: 10.1093/ajcn/nqaa204 (2020) PubMed ID: 32936878
  63. L. Shaw, D. Shaw, M. Hardisty, Philip Britz-McKibbin, and D. K. Verma Relationships Between Inhalable and Total Hexavalent Chromium Exposures in Steel Passivation, Welding and Electroplating Operations of Ontario International Journal of Hygiene and Environmental Health DOI: 10.1016/j.ijheh.2020.113601 (2020)
  64. M. Abdul-Bari, R. H. McQueen, A. P. de la Mata, J. Batcheller, and James J. Harynuk Retention and Release of Odorants in Cotton and Polyester Fabrics Following Multiple Soil/Wash Procedures Textile Research Journal DOI: 10.1177/0040517520914411 (2020)
  65. Y. Li and Liang Li Retention Time Shift Analysis and Correction in Chemical Isotope Labeling Liquid Chromatography/Mass Spectrometry for Metabolome Analysis Rapid Communications in Mass Spectrometry DOI: 10.1002/rcm.8643 (2020) PubMed ID: 31705568
  66. E. Dervishi, G. Zhang, G. Zwierzchowski, R. Mandal, David S. Wishart, and B. N. Ametaj Serum Metabolic Fingerprinting of Pre-lameness Dairy Cows by GC-MS Reveals Typical Profiles that can Identify Susceptible Cows Journal of Proteomics DOI: 10.1016/j.jprot.2019.103620 (2020) PubMed ID: 31846765
  67. S. M. Azab, A. Zamzam, M. H. Syed, R. Abdin, M. Qadura, and Philip Britz-McKibbin Serum Metabolic Signatures of Chronic Limb-Threatening Ischemia in Patients with Peripheral Artery Disease Journal of Clinical Medicine DOI: 10.3390/jcm9061877. (2020) PubMed ID: 32560175
  68. A. Foroutan, C. Fitzsimmons, r. Mandal, M. V. Berjanskii, and David S W.ishart Serum Metabolite Biomarkers for Predicting Residual Feed Intake (RFI) of Young Angus Bulls Metabolites DOI: 10.3390/metabo10120491 (2020) PubMed ID: 33266049
  69. G. Zhang, G. Zwierzchowski, R. Mandal, David S. Wishart, and B. N. Ametaj Serum Metabolomics Identifies Metabolite Panels that Differentiate Lame Dairy Cows from Healthy Ones Metabolomics DOI: 10.1007/s11306-020-01693-z (2020) PubMed ID: 32535675
  70. Wishart, David Statistical Evaluation and Integration of Multi-omics Data with MetaboAnalyst Royal Society of Chemistry (2020)
  71. L. Rohani, B. S. Borys, G. Razian, P. Naghsh, S. Liu, A. A. Johnson, P. Machiraju, H. Holland, Ian A. Lewis, R. A. Groves, D. Toms, P. M. K. Gordon, J. W. Li, T. So, T. Dang, M. S. Kallos, and D. E. Rancourt. Stirred Suspension Bioreactors Maintain Naive Pluripotency of Human Pluripotent Stem Cells Nature Communications Biology DOI: 10.1038/s42003-020-01218-3 (2020) PubMed ID: 32895477
  72. M. J. Lemieux and Michael Overduin Structure and Function of Proteins in Membranes and Nanodiscs Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes DOI: 10.1016/j.bbamem.2020.183445 (2020) PubMed ID: 32841614
  73. J. A. Bryant, F. C. Morris, T. J. Knowles, R. Maderbocus, E. Heinz, G. Boelter, D. Alodaini, A. Colyer, P. J. Wotherspoon, K. A. Staunton, M. Jeeves, D. F. Browing, Y. R. Sevastsyanovich, T. J. Wells, A. E. Rossiter, V. N. Bavro, P. Sridhar, D. G. Ward, Z. chong, E. C. Goodall, C. Icke, A. C. Teo, S. Chng, D. I. Roper, T. Lithgow, A. F. Cunningham, M. Banzhaf, MIchael Overduin, and I. R. Henderson Structure of Dual-BON Domain Protein DolP Identifies Phospholipid Binding as a New Mechanism for Protein Localization eLife DOI: 10.7554/eLife.62614 (2020) PubMed ID: 33315009
  74. D. Chen, J. Han, D. Schibli, Z. Zhang, and Christoph H. Borchers Supermolecule-assisted Imaging of Low-molecular-weight Quaternary-ammonium Compounds by MALDI-MS of their Non-covalent Complexes with Cucurbit[7]uril RSC Advances DOI: 10.1039/D0RA04604C (2020)
  75. S. F. Graham, O. Turkoglu, A. Yilmaz, I. Ustun, Z. Ugur, T. Bjorndahl, B. Han, R. Mandal, David S. Wishart, and R. O. Bahado-Singh Targeted Metabolomics Highlights Perturbed Metabolism in the Brain of Autism Spectrum disorder Sufferers Metabolites DOI: 10.1007/s11306-020-01685-z (2020) PubMed ID: 32333121
  76. A. Foroutan, C. Fitzsimmons, R. Mandal, H. Piri-Moghadam, J. Zheng, A. Guo, C. Li, L. L. Guan, and David S. Wishart The Bovine Metabolome Metabolites DOI: 10.3390/metabo10060233 (2020) PubMed ID: 32517015
  77. T. Gutierrez, H. Qi, N. Tahbaz, L. A. Milburn, E. Lucchinetti, P. Lou, M. Zaugg, P. G. LaPointe, P. Mercier, Michael Overduin, H. Bischof, S. Burgstaller, R. Malli, K. Ballanyi, J. Shuai, and T. Simmen The ER Chaperone Calnexin Controls Mitochondrial Positioning and Respiration Science Signaling DOI: 10.1126/scisignal.aax6660 (2020) PubMed ID: 32606038
  78. Y. Lopez-Hernandez, J. J. Oropeza-Valdez, J. O. Blanco-Sandate, A. S. Herrara-Van Oostdam, J. Zheng, A. C. Guo, V. Lima-Rogel, R. Rajabzadeh, M. Salgado-Bustamante, J. Adrian-Lopez, C. G. Castillo, E. R. Arguelles, J. Monarrez-Espino, R. Mandal, and David S. Wishart The Urinary Metabolome of Healthy Newborns Metabolites DOI: 10.3390/metabo10040165 (2020) PubMed ID: 32340350
  79. X. Dong, J. E. Rattray, D. C. Campbell, J. Webb, A. Chakraborty, O. Adebayo, S. Matthews, C. Li, M. Fowler, A. Macdonald, R. A. Groves, Ian A. Lewis, S. H. Wang, D. Mayumi, C. Greening, and C. R. J. Hubert Thermogenic Hydrocarbons Sustain Diverse Subseafloor Microbial Communities in Deep Sea Cold Seep Sediments Nature Communications DOI: 10.1101/2020.02.02.928283 (2020)
  80. S. L. Nam, A. P. de la Mata, R. P. Dias, and James J. Harynuk Towards Standardization of Data Normalization Strategies to Improve Urinary Metabolomics Studies by GC�GC-TOFMS Metabolites DOI: 10.3390/metabo10090376 (2020) PubMed ID: 32961779
  81. G. Zhang, E. Dervishi, G. Zwierzchowski, R. Mandal, David S. Wishart, and B. N. Ametaj Urinary Metabolomics Around Parturition Identifies Metabolite Alterations in Dairy Cows Affected Postpartum by Lameness: Preliminary Study Diary Dairy DOI: 10.3390/dairy1010002 (2020)
  82. E. F. Eckel, G. Zhang, E. Dervishi, G. Zwierzchowski, R. Mandal, David S. Wishart, and B. N. Ametaj Urinary Metabolomics Fingerprinting Around Parturition Identifies Metabolites that Differentiate Lame Dairy Cows from Healthy Ones Animals DOI: 10.1017/S1751731120001172 (2020) PubMed ID: 32498732
  83. M. Wyss, K. Brown, C. Thomson, F. Terra, F. Ronchi, D. Bihan, Ian A. Lewis, M. B. Geuking, and K. D. McCoy Using Precisely Defined in vivo Microbiotas to Understand Microbial Regulation of IgE Frontiers in Immunology DOI: 10.3389/fimmu.2019.03107 (2020) PubMed ID: 32010146
  84. T. D. Blydt-Hansen, A. Sharma, I. W.Gibson,C. Wiebe, A. P. Sharma, V. Langlois, C. W. Teoh, D. Rush, P. Nickerson, David S. Wishart, and J. Ho Validity and Utility of Urinary CXCL10/Cr Immune Monitoring in Pediatric Kidney Transplant Recipients American Journal of Transplantation DOI: 10.1111/ajt.16336 (2020) PubMed ID: 33034126
  85. M. A. Anwar, A. A. Barrera-Machuca, N. Calderon, W. Wang, D. Tausan, T. Vayali, David S. Wishart, P. Cullis, and R. Fraser Value-based Healthcare Delivery through Metabolomics-based Personalized Health Pplatform Healthcare Management Forum DOI: 10.1177/0840470420904733 (2020) PubMed ID: 32077764
  86. R. Mandal, R. Cano, C. D. Davis, D. Hayashi, S. A. Jackson, C. M. Jones, J. W. Lampe, M. E. Latulippe, N. J. Lin, K. A. Lippa, P. Piotrowski, S. M. Da Silva, K. S. Swanson, and David S. Wishart Workshop Report: Toward the Development of a Hhuman Whole Stool Reference Material for Metabolomic and Metagenomic Gut Microbiome Measurements Metabolomics DOI: 10.1007/s11306-020-01744-5 (2020) PubMed ID: 33164148


  1. Benjamin Goudey, Bowen J Fung, Christine Schieber, Noel G Faux, Alzheimer’s Disease Metabolomics Consortium (David Wishart), Alzheimer’s Disease Neuroimaging Initiative A blood-based signature of cerebrospinal fluid Aβ1-42 status Scientific Reports 10.1038/s41598-018-37149-7 (2019) PubMed ID: 30853713
  2. Marcia A LeVatte, Matthias Lipfert, Jiamin Zheng, David S Wishart A fast, sensitive, single-step colorimetric dipstick assay for quantifying ascorbic acid in urine Analytical biochemistry 10.1016/j.ab.2019.05.015 (2019) PubMed ID: 31153872
  3. Marco De Giorgi, Kelsey E Jarrett, Jason C Burton, Alexandria M Doerfler, Ayrea Hurley, Ang Li, Rachel H Hsu, Mia Furgurson, Jun Han, Christoph H Borchers, William R Lagor Acute Liver-Specific Deletion of HMG-CoA Reductase Results in Depletion of Essential Isoprenoids and ER Stress Arteriosclerosis, Thrombosis, and Vascular Biology (2019)
  4. Ray O Bahado‐Singh, Jiri Sonek, David McKenna, David Cool, Buket Aydas, Onur Turkoglu, Trent Bjorndahl, Rupasri Mandal, David Wishart, Perry Friedman, Stewart F Graham, Ali Yilmaz Artificial intelligence and amniotic fluid multiomics: the prediction of perinatal outcome in asymptomatic women with short cervix Ultrasound in Obstetrics & Gynecology 10.1002/uog.20168 (2019) PubMed ID: 30381856
  5. Jonas Patron, Arnau Serra Cayuela, Beomsoo Han, Carin Li, David Scott Wishart Assessing the performance of genome-wide association studies for predicting disease risk BioRxiv (2019)
  6. Lipfert, M., Rout, M. K., Berjanskii, M., Wishart, D. S. Automated Tools for the Analysis of 1D-NMR and 2D-NMR Spectra Methods in molecular biology 10.1007/978-1-4939-9690-2_24 (2019) PubMed ID: 31463859
  7. Mohammad A Anwar, Darlene Liying Dai, Janet Wilson‐McManus, Derek Smith, Gordon A Francis, Christoph H Borchers, Bruce M McManus, John S Hill, Gabriela V Cohen Freue Back Cover: Multiplexed LC–ESI–MRM‐MS‐based Assay for Identification of Coronary Artery Disease Biomarkers in Human Plasma PROTEOMICS–Clinical Applications 10.1002/prca.201970044 (2019)
  8. Derrick Blackmore, Zaeem Siddiqi, Liang Li, Nan Wang, Walter Maksymowych Beyond the antibodies: serum metabolomic profiling of myasthenia gravis Metabolomics 10.1007/s11306-019-1571-9 (2019) PubMed ID: 31372762
  9. Yannick Djoumbou-Feunang, Jarlei Fiamoncini, Alberto Gil-de-la-Fuente, Russell Greiner, Claudine Manach, David S Wishart BioTransformer: a comprehensive computational tool for small molecule metabolism prediction and metabolite identification Journal of cheminformatics 10.1186/s13321-018-0324-5 (2019) PubMed ID: 30612223
  10. Alberto Gil-de-la-Fuente, Joanna Godzien, Sergio Saugar, Rodrigo Garcia-Carmona, Hasan Badran, David S Wishart, Coral Barbas, Abraham Otero CEU Mass Mediator 3.0: A Metabolite Annotation Tool Journal of Proteome Research 10.1021/acs.jproteome.8b00720 (2019) PubMed ID: 30574788
  11. Yannick Djoumbou-Feunang, Allison Pon, Naama Karu, Jiamin Zheng, Carin Li, David Arndt, Maheswor Gautam, Felicity Allen, David S Wishart CFM-ID 3.0: Significantly Improved ESI-MS/MS Prediction and Compound Identification Metabolites 10.3390/metabo9040072 (2019) PubMed ID: 31013937
  12. David Shultis, Pralay Mitra, Xiaoqiang Huang, Jarrett Johnson, Naureen Aslam Khattak, Felicia Gray, Clint Piper, Jeff Czajka, Logan Hansen, Bingbing Wan, Krishnapriya Chinnaswamy, Liu Liu, Mi Wang, Jingxi Pan, Jeanne Stuckey, Tomasz Cierpicki, Christoph H Borchers, Shaomeng Wang, Ming Lei, Yang Zhang Changing the Apoptosis Pathway through Evolutionary Protein Design Journal of molecular biology 10.1016/j.jmb.2018.12.016 (2019) PubMed ID: 30625288
  13. Filipa Teixeira, Eric Tse, Helena Castro, Karl AT Makepeace, Ben A Meinen, Christoph H Borchers, Leslie B Poole, James C Bardwell, Ana M Tomás, Daniel R Southworth, Ursula Jakob Chaperone activation and client binding of a 2-cysteine peroxiredoxin Nature communications 10.1038/s41467-019-08565-8 (2019) PubMed ID: 30737390
  14. Michelle Saoi, Michael Percival, Carine Nemr, Alice Li, Martin Gibala, Philip Britz-McKibbin Characterization of the Human Skeletal Muscle Metabolome for Elucidating the Mechanisms of Bicarbonate Ingestion on Strenuous Interval Exercise Analytical Chemistry 10.1021/acs.analchem.9b00149 (2019) PubMed ID: 30835436
  15. Foroutan A., Guo A.C., Vazquez- Fresno R., Lipfert M., Zhang L., Zheng J., Badran H., Budinski Z., Mandal R., Ametaj B.N., Wishart D.S. Chemical Composition of Commercial Cow's Milk Journal of agricultural and food chemistry 10.1021/acs.jafc.9b00204 (2019) PubMed ID: 30994344
  16. Dorothea Mung, Liang Li Chemical isotope labeling liquid chromatography mass spectrometry for investigating acute dietary effects of cow milk consumption on human urine metabolome Journal of Food and Drug Analysis 10.1016/j.jfda.2018.10.007 (2019) PubMed ID: 30987728
  17. Yoshimasa Oyama, Colleen M Bartman, Stephanie Bonney, J Scott Lee, Lori A Walker, Jun Han, Christoph H Borchers, Peter M Buttrick, Carol M Aherne, Nathan Clendenen, Sean P Colgan, Tobias Eckle Circadian light-mediated endothelial metabolic reprogramming bioRxiv 10.1016/j.celrep.2019.07.020 (2019)
  18. Drall, K. M., Tun, H. M., Morales-Lizcano, N. P., Konya, T. B., Guttman, D. S., Field, C. J., Mandal, R., Wishart, D. S., Becker, A. B., Azad, M. B., Lefebvre, D. L., Mandhane, P. J., Moraes, T. J., Sears, M. R., Turvey, S. E., Subbarao, P., Scott, J. A., Kozyrskyj, A. L Clostridioides difficile Colonization Is Differentially Associated With Gut Microbiome Profiles by Infant Feeding Modality at 3-4 Months of Age 10 Frontiers in immunology 3389/fimmu.2019.02866 (2019) PubMed ID: 31921134
  19. Ammar Hassanzadeh Keshteli, Karen L Madsen, Rupasri Mandal, Guy E Boeckxstaens, Premysl Bercik, Giada De Palma, David E Reed, David Wishart, Stephen Vanner, Levinus A Dieleman Comparison of the metabolomic profiles of irritable bowel syndrome patients with ulcerative colitis patients and healthy controls: new insights into pathophysiology and potential biomarkers Alimentary pharmacology & therapeutics 10.1111/apt.15141 (2019) PubMed ID: 30706502
  20. Nicholas I Brodie, Konstantin I Popov, Evgeniy V Petrotchenko, Nikolay V Dokholyan, Christoph H Borchers Conformational ensemble of native α-synuclein in solution as determined by short-distance crosslinking constraint-guided discrete molecular dynamics simulations PLoS computational biology 10.1371/journal.pcbi.1006859 (2019) PubMed ID: 30917118
  21. Deying Chen, Jiong Yu, Zhehua Zhang, Xiaoling Su, Liang Li, Lanjuan Li Controlling Preanalytical Process in High-Coverage Quantitative Metabolomics: Spot-Sample Collection for Mouse Urine and Fecal Metabolome Profiling Analytical Chemistry 10.1021/acs.analchem.9b00310 (2019) PubMed ID: 30900868
  22. V Boczonadi, MS King, AC Smith, M Olahova, B Bansagi, A Roos, F Eyassu, C Borchers, V Ramesh, H Lochmüller, T Polvikoski, RG Whittaker, A Pyle, H Griffin, RW Taylor, PF Chinnery, AJ Robinson, ERS Kunji, R Horvath Correction: Mitochondrial oxodicarboxylate carrier deficiency is associated with mitochondrial DNA depletion and spinal muscular atrophy–like disease Genetics in medicine: official journal of the American College of Medical Genetics 10.1038/s41436-019-0506-1 (2019) PubMed ID: 31028354
  23. Evgeniy V Petrotchenko, Jason J Serpa, Christoph H Borchers Cross‐linking Applications in Structural Proteomics Proteomics for Biological Discovery 10.1002/9781119081661.ch7 (2019)
  24. Vijaya Kumar Hinge, Nikolay Blinov, Dipankar Roy, W Ted Allison, David S Wishart, Andriy Kovalenko Design and optimization of nucleic acid derivatives for inhibition of prion-like propagation at W32 site of SOD1 enzyme in Amyotrophic Lateral Sclerosis PRION (2019)
  25. Xiaohang Wang, Wei Han, Jing Yang, David Westaway, Liang Li Development of chemical isotope labeling LC-MS for tissue metabolomics and its application for brain and liver metabolome profiling in Alzheimer's disease mouse model Analytica Chimica Acta 10.1016/j.aca.2018.10.060 (2019) PubMed ID: 30661596
  26. Gabriele Rocchetti, Sudarshana Reddy Bhumireddy, Gianluca Giuberti, Rupasri Mandal, Luigi Lucini, David S Wishart Edible nuts deliver polyphenols and their transformation products to the large intestine: An in vitro fermentation model combining targeted/untargeted metabolomics Food research international 10.1016/j.foodres.2018.09.012 (2019) PubMed ID: 30717008
  27. Ammar Hassanzadeh Keshteli, Karen L Madsen, Rupasri Mandal, Guy E Boeckxstaens, Premysl Bercik, Giada De Palma, David E Reed, David Wishart, Stephen Vanner, Levinus A Dieleman Editorial: metabolomic biomarkers for colorectal adenocarcinoma and in the differentiation between irritable bowel syndrome and ulcerative colitis in clinical remission - confounded by the gut microbiome? Authors' reply Alimentary pharmacology & therapeutics 10.1111/apt.15200 (2019) PubMed ID: 30920043
  28. Wellington, N., Macklai, S., Britz-McKibbin, P Elucidating the Anomalous Binding Enhancement of Isoquinoline Boronic Acid for Sialic Acid Under Acidic Conditions: Expanding Biorecognition Beyond Vicinal Diols Chemistry 10.1002/chem.201904442 (2019) PubMed ID: 31596002
  29. Yoshimasa Oyama, Colleen M Bartman, Stephanie Bonnie, J Scott Lee, Lori A Walker, Jun Han, Christoph H Borchers, Peter M Buttrick, Nathan Clendenen, Sean P Colgan, Tobias Eckle Endothelial specific PER2 at the crossroads of light elicited circadian amplitude enhancement as novel cardioprotective strategy and transcriptional regulation of HIF1A-dependent metabolic adaptation to myocardial ischemia bioRxiv 10.1101/561340 (2019)
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  33. Rosa Vázquez-Fresno, Albert Remus R Rosana, Tanvir Sajed, Tuviere Onookome-Okome, Noah A Wishart, David S Wishart Herbs and Spices-Biomarkers of Intake Based on Human Intervention Studies–A Systematic Review Genes & nutrition 10.1186/s12263-019-0636-8 (2019) PubMed ID: 31143299
  34. Saoi, M., Sasaki, K., Sagawa, H., Abe, K., Kogiso, T., Tokushige, K., Hashimoto, E., Ohashi, Y., Britz-McKibbin, P High Throughput Screening of Serum γ-Glutamyl Dipeptides for Risk Assessment of Nonalcoholic Steatohepatitis with Impaired Glutathione Salvage Pathway Journal of proteome research 10.1021/acs.jproteome.9b00405 (2019) PubMed ID: 31483669
  35. Meera Shanmuganathan, Sabrina Macklai, Clara Barrenas Cardenas, Zachary Kroezen, Marcus Kim, William Zizek, Howard Lee, Philip Britz-McKibbin High-throughput and Comprehensive Drug Surveillance Using Multisegment Injection-Capillary Electrophoresis-Mass Spectrometry JoVE (Journal of Visualized Experiments) 10.3791/58986 (2019) PubMed ID: 31081805
  36. Wajiha Gohir, Katherine M Kennedy, Jessica G Wallace, Michelle Saoi, Christian J Bellissimo, Philip Britz‐McKibbin, Jim J Petrik, Michael G Surette, Deborah M Sloboda High‐fat diet intake modulates maternal intestinal adaptations to pregnancy and results in placental hypoxia, as well as altered fetal gut barrier proteins and immune markers The Journal of Physiology 10.1113/JP277353 (2019) PubMed ID: 31081119
  37. Renxue Wang, Jonathan A Sheps, Lin Liu, Jun Han, Patrick SK Chen, Jason Lamontagne, Peter D Wilson, Ian Welch, Christoph H Borchers, Victor Ling Hydrophilic bile acids prevent liver damage caused by lack of biliary phospholipid in Mdr2−/− mice Journal of lipid research 10.1194/jlr.M088070 (2019) PubMed ID: 30416103
  38. Simon Hayek, Nassima Bekaddour, Laurie Besson, Rodolphe Alves de Sousa, Nicolas Pietrancosta, Sébastien Viel, Nikaia Smith, Yves Jacob, Sébastien Nisole, Rupasri Mandal, David S Wishart, Thierry Walzer, Jean-Philippe Herbeuval, Pierre-Olivier Vidalain Identification of Primary Natural Killer Cell Modulators by Chemical Library Screening with a Luciferase-Based Functional Assay SLAS DISCOVERY: Advancing Life Sciences R&D 10.1177/2472555218797078 (2019) PubMed ID: 30184441
  39. Golam M Uddin, Liyan Zhang, Saumya Shah, Arata Fukushima, Cory S Wagg, Keshav Gopal, Rami Al Batran, Simran Pherwani, Kim L Ho, Jamie Boisvenue, Qutuba G Karwi, Tariq Altamimi, David S Wishart, Jason RB Dyck, John R Ussher, Gavin Y Oudit, Gary D Lopaschuk Impaired branched chain amino acid oxidation contributes to cardiac insulin resistance in heart failure Cardiovascular diabetology 31277657 (2019) PubMed ID: 10
  40. Fengfeng Mao, Teng Liu, Xinfeng Hou, Hanqing Zhao, Wenhui He, Cong Li, Zhiyi Jing, Jianhua Sui, Fengchao Wang, Xiaohui Liu, Jun Han, Christoph H Borchers, Jian-She Wang, Wenhui Li Increased sulfation of bile acids in mice and human subjects with sodium taurocholate cotransporting polypeptide deficiency Journal of Biological Chemistry 10.1074/jbc.RA118.007179 (2019) PubMed ID: 31201272
  41. Chia-Wei Hsu, Yi-Ting Chen, Ya-Ju Hsieh, Kai-Ping Chang, Pei-Chun Hsueh, Ting-Wen Chen, Jau-Song Yu, Yu-Sun Chang, Liang Li, Chih-Ching Wu Integrated analyses utilizing metabolomics and transcriptomics reveal perturbation of the polyamine pathway in oral cavity squamous cell carcinoma Analytica Chimica Acta 10.1016/j.aca.2018.10.070 (2019) PubMed ID: 30661578
  42. Yoshimasa Oyama, Colleen M Bartman, Stephanie Bonney, J Scott Lee, Lori A Walker, Jun Han, Christoph H Borchers, Peter M Buttrick, Carol M Aherne, Nathan Clendenen, Sean P Colgan, Tobias Eckle Intense light-mediated circadian cardioprotection via transcriptional reprogramming of the endothelium Cell Reports 10.1016/j.celrep.2019.07.020 (2019) PubMed ID: 31390562
  43. Thompson JW, Adams KJ, Adamski J, Asad Y, Borts D, Bowden JA, Byram G, Dang V, Dunn WB, Fernandez F, Fiehn O, Gaul DA, Hühmer AF, Kalli A, Koal T, Koeniger S, Mandal R, Meier F, Naser FJ, O'Neil D, Pal A, Patti GJ, Pham-Tuan H, Prehn C, Raynaud FI, Shen T, Southam AD, St John-Williams L, Sulek K, Vasilopoulou CG, Viant M, Winder CL, Wishart D, Zhang L, Zheng J, Moseley MA International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis Analytical chemistry 10.1021/acs.analchem.9b02908 (2019) PubMed ID: 31638379
  44. Alastair Barr, Michael Overduin JoVE Methods Collection Highlights: Protein-Protein Interactions JoVE (Journal of Visualized Experiments) 10.3791/59816 (2019) PubMed ID: 31219457
  45. Lei Chen, Nan Li, Shunnan Ge, Andres M Lozano, Darrin J Lee, Chen Yang, Liang Li, Qianrong Bai, Hongbing Lu, Jing Wang, Xin Wang, Jiaming Li, Jiangpeng Jing, Mingming Su, Longxiao Wei, Xuelian Wang, Guodong Gao Long-term results after deep brain stimulation of nucleus accumbens and the anterior limb of the internal capsule for preventing heroin relapse: An open-label pilot study Brain Stimulation 10.1016/j.brs.2018.09.006 (2019) PubMed ID: 30245163
  46. Yunong Li, Liang Li Mass Accuracy Check Using Common Background Peaks for Improving Metabolome Data Quality in Chemical Isotope Labeling LC-MS Journal of The American Society for Mass Spectrometry 10.1007/s13361-019-02248-w (2019) PubMed ID: 31140076
  47. Carol E Parker, Maria RE Warren Hines, Viorel Mocanu, Susanna F Greer, Christoph H Borchers Mass Spectrometric Determination of Protein Ubiquitination Post-Translational Modification of Proteins 10.1007/978-1-4939-9055-9_13 (2019)
  48. Michelle Saoi, Alice Li, Chris McGlory, Tanner Stokes, Mark T von Allmen, Stuart M Phillips, Philip Britz-McKibbin Metabolic Perturbations from Step Reduction in Older Persons at Risk for Sarcopenia: Plasma Biomarkers of Abrupt Changes in Physical Activity Metabolites 10.3390/metabo9070134 (2019) PubMed ID: 31288431
  49. Alicia DiBattista, Nathan McIntosh, Monica Lamoureux, Osama Y Al-Dirbashi, Pranesh Chakraborty, Philip Britz-McKibbin Metabolic Signatures of Cystic Fibrosis Identified in Dried Blood Spots for Newborn Screening Without Carrier Identification Journal of Proteome Research 10.1021/acs.jproteome.8b00351 (2019) PubMed ID: 30507207
  50. Nadine Wellington, Meera Shanmuganathan, Russell J de Souza, Michael A Zulyniak, Sandi Azab, Jonathon Bloomfield, Alicia Mell, Ritchie Ly, Dipika Desai, Sonia S Anand, Philip Britz-McKibbin Metabolic Trajectories Following Contrasting Prudent and Western Diets from Food Provisions: Robust Biomarkers of Short-Term Changes in Habitual Diet Preprints 10.20944/preprints201908.0149.v1 (2019)
  51. Indranil Sarkar, Adriana Zardini Buzatto, Ravendra Garg, Liang Li, Sylvia van Drunen Littel-van den Hurk Metabolomic and immunological profiling of respiratory syncytial virus infection after intranasal immunization with a subunit vaccine candidate Journal of Proteome Research 10.1021/acs.jproteome.8b00806 (2019) PubMed ID: 30706717
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  53. Perry Friedman, Ali Yilmaz, Amna Zeb, Aydas Buket, Amy Whitten, Ali Alhousseini, Dotun Ogunyemi, BeomSoo Han, Rupasri Mandal, David Wishart, Stewart Graham, Ray Bahado-Singh Metabolomic prediction of prematurity in asymptomatic short cervix American Journal of Obstetrics and Gynecology (2019)
  54. Phurpa Wangchuk, Konstantinos Kouremenos, Ramon M Eichenberger, Mark Pearson, Atik Susianto, David S Wishart, Malcolm J McConville, Alex Loukas Metabolomic profiling of the excretory–secretory products of hookworm and whipworm Metabolomics 10.1007/s11306-019-1561-y (2019) PubMed ID: 31254203
  55. Paiboon Tunsagool, Xiaohang Wang, Wichitra Leelasuphakul, Warangkana Jutidamrongphan, Narumon Phaonakrop, Janthima Jaresitthikunchai, Sittiruk Roytrakul, Guanqun Chen, Liang Li Metabolomic study of stress responses leading to plant resistance in mandarin fruit mediated by preventive applications of Bacillus subtilis cyclic lipopeptides Postharvest Biology and Technology 10.1016/j.postharvbio.2019.110946 (2019)
  56. Jacob, M.; Gu, X.; Luo, X.; Al-Mousa, H.; Arnaout, R.; Al-Saud, B.; L. Lopata, A.; Li, L.; Dasouki, M.; Rahman, A.M.A. Metabolomics Distinguishes DOCK8 Deficiency from Atopic Dermatitis: Towards a Biomarker Discovery Metabolites 10.3390/metabo9110274 (2019) PubMed ID: 31718082
  57. Wild, J., , Shanmuganathan, M., , Hayashi, M., , Potter, M., Britz-McKibbin, P Metabolomics for improved treatment monitoring of phenylketonuria: urinary biomarkers for non-invasive assessment of dietary adherence and nutritional deficiencies The analyst 10.1039/c9an01642b (2019) PubMed ID: 31608347
  58. David S Wishart Metabolomics for Investigating Physiological and Pathophysiological Processes Physiological reviews 10.1152/physrev.00035.2018 (2019) PubMed ID: 31434538
  59. Mai Yamamoto, Maria Ines Pinto-Sanchez, Premysl Bercik, Philip Britz-McKibbin Metabolomics reveals elevated urinary excretion of collagen degradation and epithelial cell turnover products in irritable bowel syndrome patients Metabolomics 10.1007/s11306-019-1543-0 (2019) PubMed ID: 31111238
  60. Paul M Ryan, Elaine Patterson, Ilaria Carafa, Rupasri Mandal, David S Wishart, Timothy G Dinan, John F Cryan, Kieran M Tuohy, Catherine Stanton, R Paul Ross Metformin and DPP-4 Inhibitor Differentially Modulate the Intestinal Microbiota and Plasma Metabolome of Metabolically Dysfunctional Mice Canadian Journal of Diabetes 10.1016/j.jcjd.2019.05.008 (2019)
  61. Ammar H Keshteli, Richa Chibbar, Rupasri Mandal, David S Wishart, Levinus A Dieleman Mo1846 – Ulcerative Colitis (UC) Patients with Primary Sclerosing Cholangitis (PSC) Have Distinctive Serum Metabolomic Fingerprints Versus Uc Patients Without Psc Gastroenterology 10.1016/S0016-5085(19)39113-9 (2019)
  62. Xiaowei Shi, Jingqi Liu, Deying Chen, Minglei Zhu, Jiong Yu, Haiyang Xie, Lin Zhou, Liang Li, Shusen Zheng MSC-triggered metabolomic alterations within liver-resident immune cells isolated from CCl4-induced mouse ALI model detected by CIL LC-MS Experimental Cell Research 10.1016/j.yexcr.2019.111511 (2019) PubMed ID: 31362001
  63. Mohammad A Anwar, Darlene Liying Dai, Janet Wilson‐McManus, Derek Smith, Gordon A Francis, Christoph H Borchers, Bruce M McManus, John S Hill, Gabriela V Cohen Freue Multiplexed LC–ESI–MRM‐MS‐based Assay for Identification of Coronary Artery Disease Biomarkers in Human Plasma PROTEOMICS–Clinical Applications 10.1002/prca.201700111 (2019) PubMed ID: 30632678
  64. Michael Overduin, Mansoore Esmaili Native Nanodiscs and the Convergence of Lipidomics, Metabolomics, Interactomics and Proteomics Applied Sciences 10.3390/app9061230 (2019)
  65. Meera Shanmuganathan, Philip Britz-McKibbin New Advances for Newborn Screening of Inborn Errors of Metabolism by Capillary Electrophoresis-Mass Spectrometry (CE-MS) Clinical Applications of Capillary Electrophoresis 10.1007/978-1-4939-9213-3_10 (2019) PubMed ID: 30847789
  66. Meera Shanmuganathan, Philip Britz-McKibbin New Advances in Amino Acid Profiling in Biological Samples by Capillary Electrophoresis-Mass Spectrometry Amino Acid Analysis 10.1007/978-1-4939-9639-1_25 (2019) PubMed ID: 31347129
  67. David S Wishart NMR metabolomics: A look ahead Journal of Magnetic Resonance 10.1016/j.jmr.2019.07.013 (2019) PubMed ID: 31377153
  68. Abdul-Hamid Emwas, Raja Roy, Ryan T McKay, Leonardo Tenori, Edoardo Saccenti, GA Gowda, Daniel Raftery, Fatimah Alahmari, Lukasz Jaremko, Mariusz Jaremko, David S Wishart Nmr spectroscopy for metabolomics research Metabolites 10.3390/metabo9070123 (2019)
  69. Ben Archdekin, Atul Sharma, Ian W Gibson, David Rush, David S Wishart, Tom D Blydt‐Hansen Non‐invasive differentiation of non‐rejection kidney injury from acute rejection in pediatric renal transplant recipients Pediatric transplantation 10.1111/petr.13364 (2019) PubMed ID: 30719822
  70. Marynka M Ulaszewska, Christoph H Weinert, Alessia Trimigno, Reto Portmann, Cristina Andres Lacueva, René Badertscher, Lorraine Brennan, Carl Brunius, Achim Bub, Francesco Capozzi, Marta Cialiè Rosso, Chiara E Cordero, Hannelore Daniel, Stéphanie Durand, Bjoern Egert, Paola G Ferrario, Edith JM Feskens, Pietro Franceschi, Mar Garcia‐Aloy, Franck Giacomoni, Pieter Giesbertz, Raúl González‐Domínguez, Kati Hanhineva, Lieselot Y Hemeryck, Joachim Kopka, Sabine E Kulling, Rafael Llorach, Claudine Manach, Fulvio Mattivi, Carole Migné, Linda H Münger, Beate Ott, Gianfranco Picone, Grégory Pimentel, Estelle Pujos‐Guillot, Samantha Riccadonna, Manuela J Rist, Caroline Rombouts, Josep Rubert, Thomas Skurk, Pedapati SC Sri Harsha, Lieven Van Meulebroek, Lynn Vanhaecke, Rosa Vázquez‐Fresno, David Wishart, Guy Vergères Nutrimetabolomics: an integrative action for metabolomic analyses in human nutritional studies Molecular nutrition & food research 10.1002/mnfr.201800384 (2019) PubMed ID: 30176196
  71. Padma Maruvada, Johanna W Lampe, David S Wishart, Dinesh Barupal, Deirdra N Chester, Dylan Dodd, Yannick Djoumbou-Feunang, Pieter C Dorrestein, Lars O Dragsted, John Draper, Linda C Duffy, Johanna T Dwyer, Nancy J Emenaker, Oliver Fiehn, Robert E Gerszten, Frank B Hu, Robert W Karp, David M Klurfeld, Maren R Laughlin, A Roger Little, Christopher J Lynch, Steven C Moore, Holly L Nicastro, Diane M O'Brien, José M Ordovás, Stavroula K Osganian, Mary Playdon, Ross Prentice, Daniel Raftery, Nichole Reisdorph, Helen M Roche, Sharon A Ross, Shengmin Sang, Augustin Scalbert, Pothur R Srinivas, Steven H Zeisel Perspective: Dietaryiomarkers of Intake and Exposure—Exploration with Omics Approaches Advances in Nutrition 10.1093/advances/nmz075 (2019) PubMed ID: 31386148
  72. Anandram Venkatasubramanian, Vincent TK Sauer, Jocelyn N Westwood-Bachman, Kai Cui, Mike Xia, David S Wishart, Wayne K Hiebert Porous Nanophotonic Optomechanical Beams for Enhanced Mass Adsorption ACS sensors 10.1021/acssensors.8b01366 (2019) PubMed ID: 30942578
  73. Marcia A LeVatte, Matthias Lipfert, Carol Ladner-Keay, David S Wishart Preparation and characterization of a highly soluble Aβ1-42 peptide variant Protein expression and purification 10.1016/j.pep.2019.105480 (2019) PubMed ID: 31425755
  74. Irina M Larina, Andrew J Percy, Juncong Yang, Christoph H Borchers, Andrei M Nosovsky, Anatoli I Grigoriev, Evgeny N Nikolaev Protein expression changes caused by spaceflight as measured for 18 Russian cosmonauts (vol 7, 8142, 2017) SCIENTIFIC REPORTS (2019)
  75. Aidin Foroutan, Seyed Ali Goldansaz, Matthias Lipfert, David S Wishart Protocols for NMR Analysis in Livestock Metabolomics Metabolomics 10.1007/978-1-4939-9488-5_23 (2019) PubMed ID: 31127564
  76. Irina M Larina, Andrew J Percy, Juncong Yang, Christoph H Borchers, Andrei M Nosovsky, Anatoli I Grigoriev, Evgeny N Nikolaev Publisher Correction: Protein expression changes caused by spaceflight as measured for 18 Russian cosmonauts Scientific reports 10.1038/s41598-019-43121-w (2019) PubMed ID: 31171809
  77. Glenn R Masson, John E Burke, Natalie G Ahn, Ganesh S Anand, Christoph Borchers, Sébastien Brier, George M Bou-Assaf, John R Engen, S Walter Englander, Johan Faber, Rachel Garlish, Patrick R Griffin, Michael L Gross, Miklos Guttman, Yoshitomo Hamuro, Albert JR Heck, Damian Houde, Roxana E Iacob, Thomas JD Jørgensen, Igor A Kaltashov, Judith P Klinman, Lars Konermann, Petr Man, Leland Mayne, Bruce D Pascal, Dana Reichmann, Mark Skehel, Joost Snijder, Timothy S Strutzenberg, Eric S Underbakke, Cornelia Wagner, Thomas E Wales, Benjamin T Walters, David D Weis, Derek J Wilson, Patrick L Wintrode, Zhongqi Zhang, Jie Zheng, David C Schriemer, Kasper D Rand Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments Nature methods 10.1038/s41592-019-0459-y (2019) PubMed ID: 31249422
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  79. Nikolay Blinov, David S Wishart, Andriy Kovalenko Solvent Composition Effects on the Structural Properties of the Aβ42 Monomer from the 3D-RISM-KH Molecular Theory of Solvation The Journal of Physical Chemistry B 10.1021/acs.jpcb.9b00480 (2019) PubMed ID: 30811210
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  81. Zabed Mahmud, Somaya Zahran, Philip B Liu, Bela Reiz, Brandon YH Chan, Andrej Roczkowsky, Christian-Scott E McCartney, Peter L Davies, Liang Li, Richard Schulz, Peter M Hwang Structure and proteolytic susceptibility of the inhibitory C-terminal tail of cardiac troponin I Biochimica et Biophysica Acta (BBA) - General Subjects 10.1016/j.bbagen.2019.01.008 (2019) PubMed ID: 30659884
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  83. Farhana R Pinu, David J Beale, Amy M Paten, Konstantinos Kouremenos, Sanjay Swarup, Horst J Schirra, David Wishart Systems Biology and Multi-Omics Integration: Viewpoints from the Metabolomics Research Community Metabolites 10.3390/metabo9040076 (2019) PubMed ID: 31003499
  84. Chen, Y.T., Huang, H.C., Hsieh, Y.J., Fu, S.H., Li, L., Chen, C.L.., Chu, L.J., Yu, J.S. Targeting amine-and phenol-containing metabolites in urine by dansylation isotope labeling and liquid chromatography mass spectrometry for evaluation of bladder cancer biomarkers Journal of Food and Drug Analysis 10.1016/j.jfda.2018.11.008 (2019) PubMed ID: 30987717
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  91. Gabriele Rocchetti, Luigi Lucini, Gianluca Giuberti, Sudarshana Reddy Bhumireddy, Rupasri Mandal, Marco Trevisan, David S Wishart Transformation of polyphenols found in pigmented gluten-free flours during in vitro large intestinal fermentation Food Chemistry 10.1016/j.foodchem.2019.125068 (2019) PubMed ID: 31260977
  92. Nicola Cherry, Yayne-abeba Aklilu, Jeremy Beach, Philip Britz-McKibbin, Rebecca Elbourne, Jean-Michel Galarneau, Biban Gill, David Kinniburgh, Xu Zhang Urinary 1-hydroxypyrene and skin contamination in firefighters deployed to the Fort McMurray fire Annals of Work Exposures and Health 10.1093/annweh/wxz006 (2019) PubMed ID: 30753267
  93. Biban Gill, Alicia Mell, Meera Shanmuganathan, Karl Jobst, Xu Zhang, David Kinniburgh, Nicola Cherry, Philip Britz-McKibbin Urinary hydroxypyrene determination for biomonitoring of firefighters deployed at the Fort McMurray wildfire: an inter-laboratory method comparison Analytical and Bioanalytical Chemistry 10.1007/s00216-018-01569-1 (2019) PubMed ID: 30683964
  94. Allison I Daniel, Matilda E Arvidsson Kvissberg, Edward Senga, Christian J Versloot, Philliness Prisca Harawa, Wieger Voskuijl, David Wishart, Rupasri Mandal, Robert Bandsma, Céline Bourdon Urinary Organic Acids Increase After Clinical Stabilization of Hospitalized Children With Severe Acute Malnutrition Food and nutrition bulletin 10.1177/0379572119853930 (2019) PubMed ID: 31303023


  1. Keshteli, A.H., Tso, R., Dieleman, L.A., Park, H., Kroeker, K.I., Jovel, J., Gillevet, P.M., Sikaroodi, M., Mandal, R., Fedorak, R.N., Madsen, K.L. A Distinctive Urinary Metabolomic Fingerprint Is Linked With Endoscopic Postoperative Disease Recurrence in Crohn's Disease Patients. Inflamm Bowel Dis. 2018 Mar 19;24(4):861-870 10.1093/ibd/izx070 (2018) PubMed ID: 29562272
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  4. Yeganeh Khaniani, Matthias Lipfert, Dipanjan Bhattacharyya, Rolando Perez Pineiro, Jiamin Zheng, David Wishart A Simple and Convenient Synthesis of Unlabeled and 13C-Labeled 3-(3-Hydroxyphenyl)-3-Hydroxypropionic Acid and Its Quantification in Human Urine Samples Metabolites 10.3390/metabo8040080 (2018) PubMed ID: 30469313
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  1. Han, J., Tschernutter, V., Yang, J., Eckle, T., Borchers, C.H. Analysis of selected sugars and sugar phosphates in mouse heart tissue by reductive amination and liquid chromatography-electrospray ionization mass spectrometry. Anal Chem. 85(12), 5965-73 (2013) PubMed ID: 23682691
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  9. Guo, A.C., Jewison, T., Wilson, M., Liu, Y., Knox, C., Djoumbou, Y., Lo, P., Mandal, R., Krishnamurthy, R. & Wishart, D.S. ECMDB: the E. coli Metabolome Database. Nucleic Acids Res 41, D625-D630 (2013) PubMed ID: 23109553
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